Genome-wide identification and comparative expression analysis of LEA genes in watermelon and melon genomes.
Identifieur interne : 001366 ( Main/Exploration ); précédent : 001365; suivant : 001367Genome-wide identification and comparative expression analysis of LEA genes in watermelon and melon genomes.
Auteurs : Yasemin Celik Altunoglu [Turquie] ; Mehmet Cengiz Baloglu [Turquie] ; Pinar Baloglu [Turquie] ; Esra Nurten Yer [Turquie] ; Sibel Kara [Turquie]Source :
- Physiology and molecular biology of plants : an international journal of functional plant biology [ 0971-5894 ] ; 2017.
Abstract
Late embryogenesis abundant (LEA) proteins are large and diverse group of polypeptides which were first identified during seed dehydration and then in vegetative plant tissues during different stress responses. Now, gene family members of LEA proteins have been detected in various organisms. However, there is no report for this protein family in watermelon and melon until this study. A total of 73 LEA genes from watermelon (ClLEA) and 61 LEA genes from melon (CmLEA) were identified in this comprehensive study. They were classified into four and three distinct clusters in watermelon and melon, respectively. There was a correlation between gene structure and motif composition among each LEA groups. Segmental duplication played an important role for LEA gene expansion in watermelon. Maximum gene ontology of LEA genes was observed with poplar LEA genes. For evaluation of tissue specific expression patterns of ClLEA and CmLEA genes, publicly available RNA-seq data were analyzed. The expression analysis of selected LEA genes in root and leaf tissues of drought-stressed watermelon and melon were examined using qRT-PCR. Among them, ClLEA-12-17-46 genes were quickly induced after drought application. Therefore, they might be considered as early response genes for water limitation conditions in watermelon. In addition, CmLEA-42-43 genes were found to be up-regulated in both tissues of melon under drought stress. Our results can open up new frontiers about understanding of functions of these important family members under normal developmental stages and stress conditions by bioinformatics and transcriptomic approaches.
DOI: 10.1007/s12298-016-0405-8
PubMed: 28250580
PubMed Central: PMC5313409
Affiliations:
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Kastamonu</wicri:noRegion></affiliation></author><author><name sortKey="Baloglu, Mehmet Cengiz" sort="Baloglu, Mehmet Cengiz" uniqKey="Baloglu M" first="Mehmet Cengiz" last="Baloglu">Mehmet Cengiz Baloglu</name><affiliation wicri:level="1"><nlm:affiliation>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu, Turkey.</nlm:affiliation><country xml:lang="fr">Turquie</country><wicri:regionArea>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu</wicri:regionArea><wicri:noRegion>37150 Kastamonu</wicri:noRegion></affiliation></author><author><name sortKey="Baloglu, Pinar" sort="Baloglu, Pinar" uniqKey="Baloglu P" first="Pinar" last="Baloglu">Pinar Baloglu</name><affiliation wicri:level="1"><nlm:affiliation>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu, Turkey.</nlm:affiliation><country xml:lang="fr">Turquie</country><wicri:regionArea>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu</wicri:regionArea><wicri:noRegion>37150 Kastamonu</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Research and Application Center, Kastamonu University, Kastamonu, Turkey.</nlm:affiliation><country xml:lang="fr">Turquie</country><wicri:regionArea>Research and Application Center, Kastamonu University, Kastamonu</wicri:regionArea><wicri:noRegion>Kastamonu</wicri:noRegion></affiliation></author><author><name sortKey="Yer, Esra Nurten" sort="Yer, Esra Nurten" uniqKey="Yer E" first="Esra Nurten" last="Yer">Esra Nurten Yer</name><affiliation wicri:level="1"><nlm:affiliation>Department of Forest Engineering, Faculty of Forestry, Kastamonu University, Kastamonu, Turkey.</nlm:affiliation><country xml:lang="fr">Turquie</country><wicri:regionArea>Department of Forest Engineering, Faculty of Forestry, Kastamonu University, Kastamonu</wicri:regionArea><wicri:noRegion>Kastamonu</wicri:noRegion></affiliation></author><author><name sortKey="Kara, Sibel" sort="Kara, Sibel" uniqKey="Kara S" first="Sibel" last="Kara">Sibel Kara</name><affiliation wicri:level="1"><nlm:affiliation>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu, Turkey.</nlm:affiliation><country xml:lang="fr">Turquie</country><wicri:regionArea>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu</wicri:regionArea><wicri:noRegion>37150 Kastamonu</wicri:noRegion></affiliation></author></analytic><series><title level="j">Physiology and molecular biology of plants : an international journal of functional plant biology</title><idno type="ISSN">0971-5894</idno><imprint><date when="2017" type="published">2017</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Late embryogenesis abundant (LEA) proteins are large and diverse group of polypeptides which were first identified during seed dehydration and then in vegetative plant tissues during different stress responses. Now, gene family members of LEA proteins have been detected in various organisms. However, there is no report for this protein family in watermelon and melon until this study. A total of 73 <i>LEA</i> genes from watermelon (<i>ClLEA</i>) and 61 <i>LEA</i> genes from melon (<i>CmLEA</i>) were identified in this comprehensive study. They were classified into four and three distinct clusters in watermelon and melon, respectively. There was a correlation between gene structure and motif composition among each LEA groups. Segmental duplication played an important role for <i>LEA</i> gene expansion in watermelon. Maximum gene ontology of <i>LEA</i> genes was observed with poplar <i>LEA</i> genes. For evaluation of tissue specific expression patterns of <i>ClLEA</i> and <i>CmLEA</i> genes, publicly available RNA-seq data were analyzed. The expression analysis of selected <i>LEA</i> genes in root and leaf tissues of drought-stressed watermelon and melon were examined using qRT-PCR. Among them, <i>ClLEA</i>-<i>12</i>-<i>17</i>-<i>46</i> genes were quickly induced after drought application. Therefore, they might be considered as early response genes for water limitation conditions in watermelon. In addition, <i>CmLEA</i>-<i>42</i>-<i>43</i> genes were found to be up-regulated in both tissues of melon under drought stress. Our results can open up new frontiers about understanding of functions of these important family members under normal developmental stages and stress conditions by bioinformatics and transcriptomic approaches.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">28250580</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0971-5894</ISSN><JournalIssue CitedMedium="Print"><Volume>23</Volume><Issue>1</Issue><PubDate><Year>2017</Year><Month>Jan</Month></PubDate></JournalIssue><Title>Physiology and molecular biology of plants : an international journal of functional plant biology</Title><ISOAbbreviation>Physiol Mol Biol Plants</ISOAbbreviation></Journal><ArticleTitle>Genome-wide identification and comparative expression analysis of <i>LEA</i> genes in watermelon and melon genomes.</ArticleTitle><Pagination><MedlinePgn>5-21</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s12298-016-0405-8</ELocationID><Abstract><AbstractText>Late embryogenesis abundant (LEA) proteins are large and diverse group of polypeptides which were first identified during seed dehydration and then in vegetative plant tissues during different stress responses. Now, gene family members of LEA proteins have been detected in various organisms. However, there is no report for this protein family in watermelon and melon until this study. A total of 73 <i>LEA</i> genes from watermelon (<i>ClLEA</i>) and 61 <i>LEA</i> genes from melon (<i>CmLEA</i>) were identified in this comprehensive study. They were classified into four and three distinct clusters in watermelon and melon, respectively. There was a correlation between gene structure and motif composition among each LEA groups. Segmental duplication played an important role for <i>LEA</i> gene expansion in watermelon. Maximum gene ontology of <i>LEA</i> genes was observed with poplar <i>LEA</i> genes. For evaluation of tissue specific expression patterns of <i>ClLEA</i> and <i>CmLEA</i> genes, publicly available RNA-seq data were analyzed. The expression analysis of selected <i>LEA</i> genes in root and leaf tissues of drought-stressed watermelon and melon were examined using qRT-PCR. Among them, <i>ClLEA</i>-<i>12</i>-<i>17</i>-<i>46</i> genes were quickly induced after drought application. Therefore, they might be considered as early response genes for water limitation conditions in watermelon. In addition, <i>CmLEA</i>-<i>42</i>-<i>43</i> genes were found to be up-regulated in both tissues of melon under drought stress. Our results can open up new frontiers about understanding of functions of these important family members under normal developmental stages and stress conditions by bioinformatics and transcriptomic approaches.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Celik Altunoglu</LastName><ForeName>Yasemin</ForeName><Initials>Y</Initials><AffiliationInfo><Affiliation>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu, Turkey.</Affiliation><Identifier Source="ISNI">0000 0004 0399 5533</Identifier><Identifier Source="GRID">grid.412062.3</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Baloglu</LastName><ForeName>Mehmet Cengiz</ForeName><Initials>MC</Initials><AffiliationInfo><Affiliation>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu, Turkey.</Affiliation><Identifier Source="ISNI">0000 0004 0399 5533</Identifier><Identifier Source="GRID">grid.412062.3</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Baloglu</LastName><ForeName>Pinar</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu, Turkey.</Affiliation><Identifier Source="ISNI">0000 0004 0399 5533</Identifier><Identifier Source="GRID">grid.412062.3</Identifier></AffiliationInfo><AffiliationInfo><Affiliation>Research and Application Center, Kastamonu University, Kastamonu, Turkey.</Affiliation><Identifier Source="ISNI">0000 0004 0399 5533</Identifier><Identifier Source="GRID">grid.412062.3</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yer</LastName><ForeName>Esra Nurten</ForeName><Initials>EN</Initials><AffiliationInfo><Affiliation>Department of Forest Engineering, Faculty of Forestry, Kastamonu University, Kastamonu, Turkey.</Affiliation><Identifier Source="ISNI">0000 0004 0399 5533</Identifier><Identifier Source="GRID">grid.412062.3</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kara</LastName><ForeName>Sibel</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Genetics and Bioengineering, Faculty of Engineering and Architecture, Kastamonu University, 37150 Kastamonu, Turkey.</Affiliation><Identifier Source="ISNI">0000 0004 0399 5533</Identifier><Identifier Source="GRID">grid.412062.3</Identifier></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2017</Year><Month>01</Month><Day>06</Day></ArticleDate></Article><MedlineJournalInfo><Country>India</Country><MedlineTA>Physiol Mol Biol Plants</MedlineTA><NlmUniqueID>101304333</NlmUniqueID><ISSNLinking>0974-0430</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Citrullus lanatus</Keyword><Keyword MajorTopicYN="N">Cucumis melo</Keyword><Keyword MajorTopicYN="N">Drought stress</Keyword><Keyword MajorTopicYN="N">Genome-wide analysis</Keyword><Keyword MajorTopicYN="N">LEA gene family</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year><Month>08</Month><Day>17</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2016</Year><Month>11</Month><Day>29</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2017</Year><Month>3</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2017</Year><Month>3</Month><Day>3</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2017</Year><Month>3</Month><Day>3</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">28250580</ArticleId><ArticleId IdType="doi">10.1007/s12298-016-0405-8</ArticleId><ArticleId IdType="pii">405</ArticleId><ArticleId IdType="pmc">PMC5313409</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Plant Cell Environ. 2008 Dec;31(12):1781-90</Citation><ArticleIdList><ArticleId IdType="pubmed">18761701</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2000 Jan 1;28(1):235-42</Citation><ArticleIdList><ArticleId IdType="pubmed">10592235</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Evol. 2008 Sep;67(3):266-77</Citation><ArticleIdList><ArticleId IdType="pubmed">18696028</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 1987 Jul;4(4):406-25</Citation><ArticleIdList><ArticleId IdType="pubmed">3447015</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Protoc. 2015 Jun;10(6):845-58</Citation><ArticleIdList><ArticleId IdType="pubmed">25950237</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W116-20</Citation><ArticleIdList><ArticleId IdType="pubmed">15980438</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2004 Nov;56(5):689-703</Citation><ArticleIdList><ArticleId IdType="pubmed">15803408</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2015 Dec 23;10(12):e0145785</Citation><ArticleIdList><ArticleId IdType="pubmed">26700652</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem Biophys Res Commun. 2006 Sep 15;348(1):56-61</Citation><ArticleIdList><ArticleId IdType="pubmed">16875677</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Genet Genomics. 2012 Jan;287(1):39-54</Citation><ArticleIdList><ArticleId IdType="pubmed">22127413</ArticleId></ArticleIdList></Reference><Reference><Citation>Methods. 2001 Dec;25(4):402-8</Citation><ArticleIdList><ArticleId IdType="pubmed">11846609</ArticleId></ArticleIdList></Reference><Reference><Citation>Protein Sci. 2005 Oct;14(10):2601-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16155204</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta. 2001 Jan 12;1544(1-2):196-206</Citation><ArticleIdList><ArticleId IdType="pubmed">11341929</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2006 May 31;34(10):2887-905</Citation><ArticleIdList><ArticleId IdType="pubmed">16738128</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2013 Dec;30(12):2725-9</Citation><ArticleIdList><ArticleId IdType="pubmed">24132122</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2006 Dec;18(12):3355-69</Citation><ArticleIdList><ArticleId IdType="pubmed">17189346</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2008 Sep;148(1):6-24</Citation><ArticleIdList><ArticleId IdType="pubmed">18772351</ArticleId></ArticleIdList></Reference><Reference><Citation>Biol Reprod. 2010 Apr;82(4):714-24</Citation><ArticleIdList><ArticleId IdType="pubmed">20018906</ArticleId></ArticleIdList></Reference><Reference><Citation>Genomics Proteomics Bioinformatics. 2011 Dec;9(6):211-7</Citation><ArticleIdList><ArticleId IdType="pubmed">22289477</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2005 May 5;435(7038):43-57</Citation><ArticleIdList><ArticleId IdType="pubmed">15875012</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2012 Jan;40(Database issue):D302-5</Citation><ArticleIdList><ArticleId IdType="pubmed">22053084</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta. 2010 Oct;1798(10):1926-33</Citation><ArticleIdList><ArticleId IdType="pubmed">20637181</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Plant Sci. 2000 May;5(5):199-206</Citation><ArticleIdList><ArticleId IdType="pubmed">10785665</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2014 Apr 23;9(4):e96014</Citation><ArticleIdList><ArticleId IdType="pubmed">24760072</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2011 Jul;39(Web Server issue):W155-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21622958</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 1986 May;7(3):155-70</Citation><ArticleIdList><ArticleId IdType="pubmed">24302301</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86</Citation><ArticleIdList><ArticleId IdType="pubmed">22110026</ArticleId></ArticleIdList></Reference><Reference><Citation>Hum Genomics. 2004 Aug;1(5):335-44</Citation><ArticleIdList><ArticleId IdType="pubmed">15588494</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Biochem Biophys. 2003 Jan 15;409(2):357-66</Citation><ArticleIdList><ArticleId IdType="pubmed">12504903</ArticleId></ArticleIdList></Reference><Reference><Citation>Development. 2007 May;134(9):1635-41</Citation><ArticleIdList><ArticleId IdType="pubmed">17409118</ArticleId></ArticleIdList></Reference><Reference><Citation>Genom Data. 2013 Aug 14;1:2-6</Citation><ArticleIdList><ArticleId IdType="pubmed">26484050</ArticleId></ArticleIdList></Reference><Reference><Citation>Planta. 2015 Mar;241(3):757-72</Citation><ArticleIdList><ArticleId IdType="pubmed">25491641</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Rep. 2015 Jul;42(7):1163-74</Citation><ArticleIdList><ArticleId IdType="pubmed">25638043</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Genomics. 2008 Mar 04;9:118</Citation><ArticleIdList><ArticleId IdType="pubmed">18318901</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2004 Jan 23;116(2):281-97</Citation><ArticleIdList><ArticleId IdType="pubmed">14744438</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Plant Sci. 2002 Mar;7(3):106-11</Citation><ArticleIdList><ArticleId IdType="pubmed">11906833</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2012 Jul 17;109(29):11872-7</Citation><ArticleIdList><ArticleId IdType="pubmed">22753475</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W701-4</Citation><ArticleIdList><ArticleId IdType="pubmed">15980567</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 1981 Jul;68(1):187-94</Citation><ArticleIdList><ArticleId IdType="pubmed">16661868</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W609-12</Citation><ArticleIdList><ArticleId IdType="pubmed">16845082</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Int Conf Intell Syst Mol Biol. 1994;2:28-36</Citation><ArticleIdList><ArticleId IdType="pubmed">7584402</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Genomics. 2010 Apr 01;11:221</Citation><ArticleIdList><ArticleId IdType="pubmed">20359361</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2006 Jan;140(1):140-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16361514</ArticleId></ArticleIdList></Reference><Reference><Citation>J Exp Bot. 2010 Oct;61(15):4157-68</Citation><ArticleIdList><ArticleId IdType="pubmed">20729483</ArticleId></ArticleIdList></Reference><Reference><Citation>J Biotechnol. 2009 Jan 15;139(2):137-45</Citation><ArticleIdList><ArticleId IdType="pubmed">19014980</ArticleId></ArticleIdList></Reference><Reference><Citation>Theor Appl Genet. 2008 Oct;117(6):927-33</Citation><ArticleIdList><ArticleId IdType="pubmed">18629467</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 1995 Feb;27(3):619-22</Citation><ArticleIdList><ArticleId IdType="pubmed">7894024</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2000 Nov 10;290(5494):1151-5</Citation><ArticleIdList><ArticleId IdType="pubmed">11073452</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Rep. 2013 Feb;40(2):1937-46</Citation><ArticleIdList><ArticleId IdType="pubmed">23086279</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 1989 May;12(5):475-86</Citation><ArticleIdList><ArticleId IdType="pubmed">24271064</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2008 Apr 25;320(5875):486-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18436778</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Mol Biol. 2004 Mar;54(5):743-53</Citation><ArticleIdList><ArticleId IdType="pubmed">15356392</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem J. 2005 May 15;388(Pt 1):151-7</Citation><ArticleIdList><ArticleId IdType="pubmed">15631617</ArticleId></ArticleIdList></Reference><Reference><Citation>Evol Bioinform Online. 2012;8:271-92</Citation><ArticleIdList><ArticleId IdType="pubmed">22745530</ArticleId></ArticleIdList></Reference><Reference><Citation>Int J Plant Genomics. 2008;2008:619832</Citation><ArticleIdList><ArticleId IdType="pubmed">18483572</ArticleId></ArticleIdList></Reference><Reference><Citation>FEBS Lett. 2004 Nov 5;577(1-2):21-6</Citation><ArticleIdList><ArticleId IdType="pubmed">15527756</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(9):e45117</Citation><ArticleIdList><ArticleId IdType="pubmed">23024799</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Genet. 2013 Jan;45(1):51-8</Citation><ArticleIdList><ArticleId IdType="pubmed">23179023</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2005 Jan;137(1):157-67</Citation><ArticleIdList><ArticleId IdType="pubmed">15618423</ArticleId></ArticleIdList></Reference><Reference><Citation>J Hered. 2002 Jan-Feb;93(1):77-8</Citation><ArticleIdList><ArticleId IdType="pubmed">12011185</ArticleId></ArticleIdList></Reference><Reference><Citation>J Insect Physiol. 2013 Apr;59(4):377-86</Citation><ArticleIdList><ArticleId IdType="pubmed">23376561</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Physiol. 2010 Sep;154(1):373-90</Citation><ArticleIdList><ArticleId IdType="pubmed">20668063</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochim Biophys Acta. 2003 Oct 20;1630(1):25-34</Citation><ArticleIdList><ArticleId IdType="pubmed">14580676</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Microbiol. 2010 May;60(5):373-8</Citation><ArticleIdList><ArticleId IdType="pubmed">19949793</ArticleId></ArticleIdList></Reference><Reference><Citation>Plant Cell. 2000 Apr;12(4):457-60</Citation><ArticleIdList><ArticleId IdType="pubmed">10760235</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem Biophys Res Commun. 2005 May 27;331(1):325-32</Citation><ArticleIdList><ArticleId IdType="pubmed">15929202</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Turquie</li></country></list><tree><country name="Turquie"><noRegion><name sortKey="Celik Altunoglu, Yasemin" sort="Celik Altunoglu, Yasemin" uniqKey="Celik Altunoglu Y" first="Yasemin" last="Celik Altunoglu">Yasemin Celik Altunoglu</name></noRegion><name sortKey="Baloglu, Mehmet Cengiz" sort="Baloglu, Mehmet Cengiz" uniqKey="Baloglu M" first="Mehmet Cengiz" last="Baloglu">Mehmet Cengiz Baloglu</name><name sortKey="Baloglu, Pinar" sort="Baloglu, Pinar" uniqKey="Baloglu P" first="Pinar" last="Baloglu">Pinar Baloglu</name><name sortKey="Baloglu, Pinar" sort="Baloglu, Pinar" uniqKey="Baloglu P" first="Pinar" last="Baloglu">Pinar Baloglu</name><name sortKey="Kara, Sibel" sort="Kara, Sibel" uniqKey="Kara S" first="Sibel" last="Kara">Sibel Kara</name><name sortKey="Yer, Esra Nurten" sort="Yer, Esra Nurten" uniqKey="Yer E" first="Esra Nurten" last="Yer">Esra Nurten Yer</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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